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Software Setup ​

OS ​

NFS ​

Users ​

Modules (Lmod) ​

Spack ​

Installing (like here):

bash
git clone --depth=2 --branch=releases/v1.1 https://github.com/spack/spack.git ~/spack
source ~/spack/share/spack/setup-env.sh
spack list

Pre-installed compilers should be automatically recongnized by spack. You can check yourself with spack list or spack compiler list, they will appear with an [e] for external. If not, you can add them with:

bash
spack compiler find

or, more verbosely:

bash
spack compiler find /path/to/compiler/bin/

Installing ​

Parameters:

  • program@version
  • ^dependency: dependency (direct or transitive), applied to the root package
  • %dependency: direct dependency (like compiler), applied to the root or any by ^ specified intervening dependency
  • +variant or -variant/~variant: enables or disables a variant of program, f.ex. +cuda or ~mpi
  • %virtual=provider: pending description, but f.ex. %c,cxx=gcc %fortran=oneapi for using different compilers fro c,c++ and fortran

Environments ​

Creating:

bash
spack env create <name>
spack env activate <name>

Specifying:

bash
spack add <package>

Installing:

bash
spack concretize #find a consistent set of versions and dependencies for the packages
spack install

Removal:

bash
spack env deactivate
spack env rm <name>

Spack find arguments ​

TODO

Anaconda ​

Intel OneAPI ​

Compilers ​

GCC ​

LLVM ​

InfiniBand ​

Driver ​

Optional: Configuring Switch ​

OpenSM ​

IPoIB ​

Nvidia Driver ​

MPI ​

OpenMPI ​

IntelMPI ​

HPC-X ​

Slurm ​